Insights & notes from the bench.

Practical field notes on single-cell analysis, multi-omics integration, and reproducible pipelines — written by the senior scientists who run them.

Single-cell12 Apr 2026· 8 min

Single-cell RNA-seq: from raw counts to defensible biology

A practical walkthrough of what separates a usable single-cell analysis from a slide of pretty UMAPs — QC, batch effects, annotation, and how to keep your conclusions defensible at peer review.

Mangesh Bhide

Pipelines28 Mar 2026· 6 min

Reproducible HPC pipelines: why your bench needs Nextflow

Bash scripts and ad-hoc SLURM jobs do not survive the journey from PI's laptop to peer review. Here is the case for treating pipelines as first-class deliverables.

Michal Kováč

Have a research question we should write about?

Or one we should help you answer directly.

Arrange a FREE Scoping Session